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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs77484998 chr19:58222656 G/A 2.46E-5 474 15.13 17.13 17.08 KM Plot
THCA rs77505796 chr10:104647774 A/T 5.6E-9 488 15.3 17.63 32.1 KM Plot
THCA rs77518067 chr8:8372816 G/A 5.28E-10 485 16.37 16.07 8.83 KM Plot
THCA rs77521106 chr10:104980726 G/T 2.22E-7 479 15.27 17.85 10.17 KM Plot
THCA rs77524363 chr6:46092534 ATTT/A 5.53E-5 490 15.7 16.47 17.77 KM Plot
THCA rs77545467 chr7:43912545 G/A 0.000149 474 15.83 15 16.47 KM Plot
THCA rs7754778 chr6:24460148 G/A 2.8E-7 483 16.37 15.83 7.43 KM Plot
THCA rs7758531 chr6:133085302 T/C 1.18E-6 482 15.75 16.2 17.77 KM Plot
THCA rs7758703 chr6:133085417 T/C 1.18E-6 482 15.75 16.2 17.77 KM Plot
THCA rs77599737 chr1:220790217 T/C 2.55E-5 488 15.9 16.97 17.17 KM Plot
THCA rs77600190 chr7:44341600 A/T 2.33E-6 483 15.87 16.57 13.1 KM Plot
THCA rs77627085 chr6:24426311 T/C 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs77630482 chr8:52443227 G/A 0 483 16.38 14.67 7.3 KM Plot
THCA rs77634270 chr1:45945753 CAA/C 4.66E-5 489 10.4 16.07 16.87 KM Plot
THCA rs77645702 chr14:59685139 T/G 0 488 15.9 16.4 3.53 KM Plot